Biomedical Data Science Equipment

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  • Software and informatics tools
  • DaRTS (Data Request Tracking System): Used by all BDS members to track clinical data requests for research.
  • D2B2 (Database of Databases): Used as the official inventory of data sources to support the BDS.
  • GeneTegra (Federated Query System): Federated query system used by the BDS to connect multiple data sources and query them as one entity.
  • TIES (Text Information Extraction System): Open source tool to extract information from the free text pathology reports and as a data source for GeneTegra.