Gene Expression Resource
Roswell Park Cancer InstituteElm and Carlton Streets
Basic Life Science Center (BLSC)
L1-120
Buffalo, NY 14263
Director:
Norma Nowak, PhD (Interim Director)
Telephone: (716) 845-7649
Fax: (716) 845-4928
Email: norma.nowak@roswellpark.org
Facility Personnel:
Jenniffer Rothschild (Panzarella)
Research Associate
Telephone: 845-3958
Jesse Luce
Research Technologist
Telephone: 845-1740
Email: Jesse.Luce@RoswellPark.org
Operating Hours:

Monday-Friday, 9:00am-5:00pm
Equipment / Infrastructure
- Affymetrix GeneChip Scanner 3000
- Affymetrix GeneChip Fluidics Station
- Affymetrix GeneChip Hybridization Oven 640
- ABI 7900HT Sequence Detector System
- Transgenomic Wave DNA Fragment Analysis System
- PSQ Pyrosequencer for SNP/mutation analysis
- Agilent 2100 Bioanalyzer
- NanoDrop ND-1000 Spectrophotometer
- Image Analysis and Data Mining Software
Description
The Gene Expression Resource has been operational since January 2001 and primarily provides Affymetrix GeneChip technology to researchers at Roswell Park Cancer Institute (RPCI) and the University at Buffalo and their collaborators. The Resource aims to provide RPCI researchers with access to microarray technology and bioinformatics at an affordable cost, and to provide training to the research community through educational seminars for analysis of microarray data and programs designed to analyze large data sets. For information on GeneChip technology, the various types of GeneChips and organisms represented please visit http://affymetrix.com/index.affx.
The Resource maintains and provides training for real-time quantitative PCR for extension of GeneChip data and validation studies. Also available are, a Transgenomic Wave System which is used for mutation or polymorphism studies on relatively large strands of DNA (100-160 bp), and a Pyrosequencing System that is a high throughput instrument capable of identification and analysis of small nucleotide polymorphisms (SNPs) in short strands of DNA. Having access to these systems provides investigators high throughput platforms for researching any type of sequence variation.
The study of gene expression and the investigation into the roles of sequence variation in the genome are thought to be natural adjuncts to microarray analysis. Training, support and consultation are provided for investigation into the roles of DNA sequence variation in the genome.
Software and training are provided for researchers to enable them to analyze large data sets and obtain meaningful results from these experiments. A large number of state-of-the-art programs are available to afford analyses of different data types and the expertise is available to implement and advise on their usage.
emb 8/14/08


